Hello from Omaha, NE!
From June 25-28, 2015 I attended the annual meeting of the American Society of Parasitologists. In February I presented at the regional branch of this society, the North American Society of Parasitologists and was awarded a travel grant to attend the national meeting.
The conference was a great opportunity to meet colleagues in the same field and even catch up with some old friends! Woody and Jeff, fellow participants from the Avian Malaria Workshop, were also in attendance. Below is a photo of just some of the winners from around the United States who were able to attend this year's meeting thanks to a travel grant:
Outside of the conference I explored downtown Omaha, did some Couchsurfing, and checked out the city's burgeoning craft beer scene. I had a great time adventuring around the Heartland!:
I've been horribly slacking in this blog but I'm back in the lab after some vacation time and have set up a regular update schedule now so get ready for hot-off-the-presses (thermalcycler) results!
Hi all! I started this blog to keep everyone informed and involved with the work I'm doing in graduate school. While mainly geared towards friends and family, I hope that others will also find this work relevant and interesting.
Showing posts with label Haemosporidia. Show all posts
Showing posts with label Haemosporidia. Show all posts
Wednesday, August 5, 2015
Sunday, September 7, 2014
Avian Malaria (& Relatives) Workshop - Part 3 - Indentifying Blood Parasites
This post brings me to my third and concluding update on the Third Annual International Workshop on Malaria and Related Haemosporidian Parasites of Wildlife (whew - that title is epic!) [Here's Part 1 and Part 2]
The first two days of the four day workshop focused on blood smears and identifying parasites by their physical characteristics. The second two days focused on vectors and genetic techniques.
Therefore, as avian parasitologists, it is important for us to know how to identify vectors that could potentially spreading infectious agents to our birds. It's not just mosquitoes we need to be concerned about either. Each of the three parasite genera, Plasmodium, Haemoproteus, and Leucocytozoon, are transmitted by different types of insects.
The following vector images are from Avian Malaria Parasites and Other Haemosporidia by Gediminas Valkiūnas.
Plasmodium is transmitted by mosquitoes:
And Leucocytozoon is transmitted by black flies:
Each vector has its own unique set of habitat requirements. Combined with the habitat requirements of the bird hosts and the parasites, understanding these insect-vectored diseases quickly becomes quite complex.
For the purposes of this workshop we focused on mosquito vectors. We learned how to trap, identify, and dissect mosquitoes. This last skill in particular was difficult to master. Mosquitoes seem pretty big when you're swatting them on your arm but when you're actually trying to keep parts of them intact as you sever them with a small knife, believe me they seem very small.
This trap is called a gravid trap. It attracts gravid ("pregnant") female mosquitoes looking for somewhere to lay their eggs. In the bottom bucket there is a putrid liquid called (very technically) "smelly water" - a lovely mixture of cow feces, water, and yeast left to rot in the hot sun for a couple of months. The vertical contraption contains a fan at the top to suck up female mosquitoes as they come to lay their eggs.
The first two days of the four day workshop focused on blood smears and identifying parasites by their physical characteristics. The second two days focused on vectors and genetic techniques.
Vectors
Malaria, as we all know, is a vector-borne disease transmitted by mosquitoes. Insect vectors are the sites of sexual reproduction for haemosporidian parasites; without these vectors the parasites would not be able to complete their life cycle.Therefore, as avian parasitologists, it is important for us to know how to identify vectors that could potentially spreading infectious agents to our birds. It's not just mosquitoes we need to be concerned about either. Each of the three parasite genera, Plasmodium, Haemoproteus, and Leucocytozoon, are transmitted by different types of insects.
The following vector images are from Avian Malaria Parasites and Other Haemosporidia by Gediminas Valkiūnas.
Plasmodium is transmitted by mosquitoes:
Haemoproteus is transmitted by biting midges and hippoboscid flies:
And Leucocytozoon is transmitted by black flies:
Each vector has its own unique set of habitat requirements. Combined with the habitat requirements of the bird hosts and the parasites, understanding these insect-vectored diseases quickly becomes quite complex.
For the purposes of this workshop we focused on mosquito vectors. We learned how to trap, identify, and dissect mosquitoes. This last skill in particular was difficult to master. Mosquitoes seem pretty big when you're swatting them on your arm but when you're actually trying to keep parts of them intact as you sever them with a small knife, believe me they seem very small.
Mosquito Traps
Photo by Francisco Ferreira
This trap is called a gravid trap. It attracts gravid ("pregnant") female mosquitoes looking for somewhere to lay their eggs. In the bottom bucket there is a putrid liquid called (very technically) "smelly water" - a lovely mixture of cow feces, water, and yeast left to rot in the hot sun for a couple of months. The vertical contraption contains a fan at the top to suck up female mosquitoes as they come to lay their eggs.
Ellen Martinsen explaining the inner mechanism of the gravid trap - Photo by Francisco Ferreira
Photo by Francisco Ferreira
This trap is a CDC Light Trap. Developed by the Centers for Disease Control, this trap uses both carbon dioxide and light to attract in mosquitoes. You may know this already but it is only female mosquitoes that bite you. Ingeniously but frustratingly, females use your exhaled breath (CO2, carbon dioxide) to find you. This trap works in much the same way - in the dark thermos there is dry ice that sublimates to release CO2 gas. Mosquitoes fly towards it and are sucked into the mesh bag by a fan at the top of the trap. Unlike the gravid trap the CDC light trap is also equipped with a flashing light that draws in both males and females.
Identification and Dissection
One thing that is important to note at this stage is the importance of keeping your mosquito alive prior to dissection. A dead mosquito is a squishy mosquito and impossible to dissect properly. For this reason the traps are set out at night and checked the following day. Any trapped mosquitoes are brought back to the lab and kept alive in a mini habitat, such as this bug tent:
Just like parasite identification, mosquito ID was difficult at first but once we knew what to look for it became much easier. We used various physical characteristics including wings and palps to tell species apart:
From our Malaria Workshop handout materials (unknown source beyond that)
Once we knew our species and whether it was a male or a female (no use dissecting the males - they don't bite birds and therefore wont carry parasites), we moved on to dissection. We targeted both the salivary glands and the midgut of our insect vectors.
Presence of parasites in the salivary glands indicates the mosquito is a suitable vector - when mosquitoes bite they also inject an anticoagulant to keep the blood flowing. Parasites in the salivary glands will be injected into the host along with the anticoagulant.
The midgut is the site of parasite reproduction. The "male" and "female" gametes fuse to form a zygote, which then implants in the gut lining of the mosquito and proceeds to divide and divide and divide. Eventually these divisions burst out and make their way to the salivary glands.
Carter Atkinson demonstrates mosquito dissection.
Below is a video from the 1980's that we watched in the workshop. Despite its age, it is an incredibly helpful video to reference technique.
I really cannot reiterate this enough - mosquitoes are small. It was absolutely essential to use a dissecting microscope just to see what we were doing. These were the tiny tools we used:
Initially we chopped off a lot of mosquito heads and lost the glands and guts into a boogery mess of mashed mosquito. But with some fine tuning of our large (comparatively) human hands, we were eventually able to isolate our organs of interest.
Genetic Techniques
The last half of the last day focused on the use of genetics to determine the species and lineage of parasite as well as their phylogenetic relationships. We looked at several genetic sequences and became familiar with a couple different computer programs used to manipulate this kind of data.
This picture is a little difficult to see but this is what a genetic sequence looks like read out on a computer screen. Peaks of different colors correspond to specific nucleotide bases - A, G, T, or C. Mutations unique to different parasites help to determine the specific infection present in a bird. These can then be pooled to create a phylogenetic tree, which helps to visualize relationships and evolutionary patterns.
Saying Goodbye
It was so tough to say goodbye to everybody the last day. An early morning shuttle sent some students to bed early but not before a final round of "selfies" from the 2014 Malaria RCN Student Cohort:
Photos by Adam Krupski
Thank you to the Malaria RCN for this amazing opportunity. I am so grateful to have participated in this workshop and meet all these amazing biologists from around the world!
Friday, August 29, 2014
Avian Malaria (& Relatives) Workshop - Part 2 - Indentifying Blood Parasites
Here I am one year into my Master's program at San Francisco State University. Time has flown by so fast it's hard to believe a whole year has gone by already. But at the same time when I look at where I was at this time in 2013 I realize how much my skills and experience have progressed.
One year ago I didn't know how to handle a bird or set up a mist net - now I can handle and take a blood sample from a bird. I have a formal training course under my belt and work at a bird banding station.
One year ago I didn't have a single wildlife permit - now I have three (and IACUC approval from my school.)
One year ago I barely knew how to run a gel or do nested PCR or sequence a DNA segment - now these are integral pieces of my research project.
And one year ago I didn't know a thing about avian blood parasites. Now it's the focus of my project and I've participated in the International Workshop on Malaria and Related Haemosporidian Parasites of Wildlife.
In a graduate program you pick up a lot of your knowledge and tips from your advisor and fellow lab mates. That being said, nothing beats an intensive, concentrated training experience. That's what the Malaria Workshop was - after four packed days of content, I felt that my knowledge about blood parasites had taken a giant leap forward. I even gained skills that I never dreamed I would have... believe it or not, I can now dissect out the salivary glands of a mosquito.
We would look for defining morphological characteristics such as:
One year ago I didn't know how to handle a bird or set up a mist net - now I can handle and take a blood sample from a bird. I have a formal training course under my belt and work at a bird banding station.
One year ago I didn't have a single wildlife permit - now I have three (and IACUC approval from my school.)
One year ago I barely knew how to run a gel or do nested PCR or sequence a DNA segment - now these are integral pieces of my research project.
And one year ago I didn't know a thing about avian blood parasites. Now it's the focus of my project and I've participated in the International Workshop on Malaria and Related Haemosporidian Parasites of Wildlife.
Meet this year's "Haemosporidian Workshop" participants! pic.twitter.com/ui2YKOn5Nk
— Malaria RCN (@MalariaRCN) August 1, 2014
Blood Sampling and Parasite ID
The first two days of the workshop emphasized identifying parasites in blood smears under a microscope. In a past post about Avian Malaria I went into a little detail about the causative agent of malaria, Plasmodium (different species within this genus cause malaria in humans, birds, reptiles, etc.) In addition to Plasmodium there are two other genera of blood parasites within the order Haemosporidia we are concerned with: Haemoproteus and Leucocytozoon.
These three genera each have unique methods of reproduction and are spread by different insect vectors. Once you know what you're looking for, they're quite easy to tell apart under a microscope. Here's what the first two days of the workshop looked like:
First we caught some local birds:
Gray Catbird - Photo by Elin Videvall
And took some blood samples:
Strahil taking a blood sample from the brachial vein of a flycatcher - Photo by Strahil Peev
And made some blood smears - sometimes using the "Polaroid method":
Dovile blotting and drying a smear
But preferably with a fan:
Gediminas Valkiūnas fan drying blood smears - It is important to dry the slides right away because soon as they are exposed to air the parasites begin to change form. Fan drying suspends that transformation and preserves their current form.
Then we fixed the slides in methanol:
Photo by Elin Videvall
Then we stained the slides with Giemsa stain:
This process stains the cells purple - the nuclei (bird red blood cells have nuclei) and parasites are stained dark purple while the cytoplasm stays clear - Photo by Elin Videvall
Then we looked under our microscopes!:
Photo by Elin Videvall
We did this for several afternoons, looking at both our local bird slides and some "known positive" slides to practice our parasite ID. Our course instructors were very helpful when we inevitably got stuck:
Photo by Elin Videvall
This is what we saw:
Most of what you see here are avian red blood cells, which are nucleated. Right at the tip of the pointer is a Haemoproteus parasite. There are many many species of Haemoproteus that infect birds but they can be differentiated if you know what to look for.
We would look for defining morphological characteristics such as:
- Location of the pigment granules (in this picture the small dark dots scattered throughout the cell)
- Location of the parasite nucleus (light pink spot in the top right corner)
- How much of the host cell the parasite takes up and what membranes it touches (in this case the whole cell and both the nucleus and outer cell membrane - this isn't always the case!)
- General size and shape
- And more
Gediminas Valkiūnas' book has a very helpful key - we used it (as well as his direct instruction) extensively:
And this is Leucocytozoon:
Leucocytozoon parasites are much larger than the other two genera. They're the Jabba the Hutt of the parasite world:
To the untrained eye (us before this workshop) Leucocytozoon looks suspiciously like white blood cells so we had a special lecture on that as well:
Interspersed with all these parasites we also each gave a 5 minute presentation of our research projects. It was so interesting to see the different pieces of the blood parasite world that people had carved out internationally.
Paulo gives his 5 minute presentation - Photo by Strahil Peev
And this was just the first two days! Stay tuned for the third and final installment - Vectors and Summary
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